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AlphaFold monomer V2.0 prediction for transcription factor tau 138 kda subunit (P34111)

Analyse AlphaFold monomer V2.0 prediction for transcription factor tau 138 kda subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P34111
Type: protein
Length: 1,160 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
Molecule: Transcription factor tau 138 kda subunit
UniProt: P34111
Pockets: 14 · best druggability 0.53

Structure

1 distinct chain · 44% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcription factor tau 138 kda subunit	protein	1160	44% helix, 12% strand	P34111

Pockets

14 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	194	0.53	0.78	23	empty
2	274	0.49	0.74	28	empty
3	256	0.49	0.74	34	empty
4	105	0.49	0.80	20	empty
5	190	0.46	0.74	28	empty

Compared structures

9GC3 · yeast TFIIIC TauB subcomplex bound to a tRNA gene · an experimental structure of the same protein · chain A against A, TM-score 0.24
5AIM · Crystal structure of T138 central eWH domain · an experimental structure of the same protein · chain A against B, TM-score 0.08
5AIM · Crystal structure of T138 central ewh domain · an experimental structure of the same protein · chain A against B, TM-score 0.08

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P34111
Elsewhere: UniProt P34111 · AlphaFold DB P34111

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