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AlphaFold monomer V2.0 prediction for transcription initiation factor iib (P62915)

Analyse AlphaFold monomer V2.0 prediction for transcription initiation factor iib… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P62915
Type: protein
Length: 316 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
Molecule: Transcription initiation factor iib
UniProt: P62915
Pockets: 1 · best druggability 0.36

Structure

1 distinct chain · 45% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Transcription initiation factor iib	protein	316	45% helix, 3% strand	P62915

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	108	0.36	0.74	16	empty

Compared structures

8D5F · The complex of GTF2B neoantigen tgaarfdef presented by H2-kd · an experimental structure of the same protein · chain A against P, TM-score 0.03
8D5F · The complex of Gtf2b neoantigen TGAARFDEF Presented by H2-Dd · an experimental structure of the same protein · chain A against P, TM-score 0.03
8D5E · The complex of GTF2B peptide tgaasfdef presented by H2-kd · an experimental structure of the same protein · chain A against P, TM-score 0.02
8D5E · The complex of Gtf2b Peptide TGAASFDEF Presented by H2-Dd · an experimental structure of the same protein · chain A against P, TM-score 0.02

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P62915
Elsewhere: UniProt P62915 · AlphaFold DB P62915

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