Research workbench
AlphaFold monomer V2.0 prediction for transposon TF2-1 polyprotein (P0CT34)
Analyse AlphaFold monomer V2.0 prediction for transposon TF2-1 polyprotein (P0CT34) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CT34
- Type
- protein
- Length
- 1,333 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0B05083723A769b6d5CDbC8826Dd66DE061604b8
- Molecule
- Transposon TF2-1 polyprotein
- UniProt
- P0CT34
- Pockets
- 20 · best druggability 0.79
Structure
1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transposon TF2-1 polyprotein | protein | 1333 | 40% helix, 17% strand | P0CT34 |
Pockets
20 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 882 | 0.79 | 0.82 | 76 | empty |
| 2 | 1022 | 0.77 | 0.79 | 76 | empty |
| 3 | 790 | 0.76 | 0.80 | 78 | empty |
| 4 | 335 | 0.66 | 0.81 | 45 | empty |
| 5 | 426 | 0.64 | 0.78 | 46 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CT34
- Elsewhere: UniProt P0CT34 · AlphaFold DB P0CT34
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