Research workbench
AlphaFold monomer V2.0 prediction for transitional endoplasmic reticulum ATPase homolog 1 (P54811)
Analyse AlphaFold monomer V2.0 prediction for transitional endoplasmic reticulum ATPase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P54811
- Type
- protein
- Length
- 809 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- Transitional endoplasmic reticulum ATPase homolog 1
- UniProt
- P54811
- Pockets
- 8 · best druggability 0.73
Structure
1 distinct chain · 43% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transitional endoplasmic reticulum ATPase homolog 1 | protein | 809 | 43% helix, 17% strand | P54811 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 815 | 0.73 | 0.78 | 88 | empty |
| 2 | 684 | 0.68 | 0.76 | 48 | empty |
| 3 | 227 | 0.61 | 0.81 | 26 | empty |
| 4 | 85 | 0.51 | 0.84 | 20 | empty |
| 5 | 129 | 0.48 | 0.79 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P54811
- Elsewhere: UniProt P54811 · AlphaFold DB P54811
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