Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase TDRD9 (Q8NDG6)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase TDRD9 (Q8NDG6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8NDG6
- Type
- protein
- Length
- 1,382 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaBbD25c712F347D2D5B94763092EE1754834376F
- Molecule
- ATP-dependent RNA helicase TDRD9
- UniProt
- Q8NDG6
- Pockets
- 17 · best druggability 0.87
Structure
1 distinct chain · 35% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent RNA helicase TDRD9 | protein | 1382 | 35% helix, 20% strand | Q8NDG6 |
Pockets
17 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1038 | 0.87 | 0.88 | 102 | empty |
| 2 | 1136 | 0.81 | 0.82 | 123 | empty |
| 3 | 630 | 0.70 | 0.78 | 68 | empty |
| 4 | 507 | 0.67 | 0.78 | 52 | empty |
| 5 | 447 | 0.64 | 0.77 | 53 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8NDG6
- Elsewhere: UniProt Q8NDG6 · AlphaFold DB Q8NDG6
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