Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase TDRD9 (B8A4F4)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase TDRD9 (B8A4F4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8A4F4
- Type
- protein
- Length
- 1,342 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x65b42577b5Bb934B59afF2aA701E1BA18026B799
- Molecule
- ATP-dependent RNA helicase TDRD9
- UniProt
- B8A4F4
- Pockets
- 18 · best druggability 0.87
Structure
1 distinct chain · 38% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent RNA helicase TDRD9 | protein | 1342 | 38% helix, 21% strand | B8A4F4 |
Pockets
18 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1144 | 0.87 | 0.88 | 107 | empty |
| 2 | 616 | 0.77 | 0.83 | 75 | empty |
| 3 | 525 | 0.69 | 0.79 | 44 | empty |
| 4 | 499 | 0.67 | 0.78 | 52 | empty |
| 5 | 224 | 0.65 | 0.84 | 30 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8A4F4
- Elsewhere: UniProt B8A4F4 · AlphaFold DB B8A4F4
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