Research workbench

AlphaFold monomer V2.0 prediction for L-threonine 3-dehydrogenase (O58389)

Analyse AlphaFold monomer V2.0 prediction for L-threonine 3-dehydrogenase (O58389) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: O58389
Type: protein
Length: 348 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x9f35692978F4237A8ac3191dAaC7Cb1B05Ebf2E2
Molecule: L-threonine 3-dehydrogenase
UniProt: O58389
Pockets: 1 · best druggability 0.66

Structure

1 distinct chain · 30% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	L-threonine 3-dehydrogenase	protein	348	30% helix, 26% strand	O58389

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	582	0.66	0.77	48	empty

Compared structures

2DFV · Hyperthermophilic threonine dehydrogenase from Pyrococcus horikoshii · an experimental structure of the same protein · chain A against A, TM-score 0.99
2DFV · Hyperthermophilic threonine dehydrogenase from pyrococcus horikoshii · an experimental structure of the same protein · chain A against A, TM-score 0.99
2D8A · Crystal Structure of PH0655 from Pyrococcus horikoshii OT3 · an experimental structure of the same protein · chain A against A, TM-score 0.95
2D8A · Crystal structure of PH0655 from pyrococcus horikoshii OT3 · an experimental structure of the same protein · chain A against A, TM-score 0.95

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O58389
Elsewhere: UniProt O58389 · AlphaFold DB O58389

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