Research workbench
AlphaFold monomer V2.0 prediction for transaldolase (Q5F6E9)
Analyse AlphaFold monomer V2.0 prediction for transaldolase (Q5F6E9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5F6E9
- Type
- protein
- Length
- 351 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd91633319BDB0a92cbC4f08DeA734Bf74C030064
- Molecule
- Transaldolase
- UniProt
- Q5F6E9
- Pockets
- 2 · best druggability 0.50
Structure
1 distinct chain · 58% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transaldolase | protein | 351 | 58% helix, 13% strand | Q5F6E9 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.50 | 0.80 | 24 | empty |
| 2 | 58 | 0.29 | 0.75 | 15 | empty |
Compared structures
- 7OEY · Neisseria gonnorhoeae variant E93Q at 1.35 ångström resolution · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 6ZWH · Neisseria gonorrhoeae transaldolase at 1.5 ångström resolution · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 6ZX4 · Neisseria gonorrhoeae transaldolase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 6ZX4 · Neisseria gonorrhoeae transaldolase · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 7B0L · Neisseria gonorrhoeae transaldolase, low-dose inhouse · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3CLM · Crystal structure of transaldolase (YP_208650.1) from neisseria gonorrhoeae fa 1090 at… · an experimental structure of the same protein · chain A against A, TM-score 0.99
- 3CLM · Crystal structure of transaldolase (YP_208650.1) from Neisseria gonorrhoeae FA 1090 at… · an experimental structure of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5F6E9
- Elsewhere: UniProt Q5F6E9 · AlphaFold DB Q5F6E9
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