Research workbench
AlphaFold monomer V2.0 prediction for transcription initiation factor tfiid subunit 5 (Q6S7B0)
Analyse AlphaFold monomer V2.0 prediction for transcription initiation factor tfiid… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6S7B0
- Type
- protein
- Length
- 669 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x02C1142a7b19Fa3FFB07DbCbC357c38F332D0630
- Molecule
- Transcription initiation factor tfiid subunit 5
- UniProt
- Q6S7B0
- Pockets
- 10 · best druggability 0.86
Structure
1 distinct chain · 28% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcription initiation factor tfiid subunit 5 | protein | 669 | 28% helix, 26% strand | Q6S7B0 |
Pockets
10 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 942 | 0.86 | 0.87 | 61 | empty |
| 2 | 906 | 0.75 | 0.79 | 83 | empty |
| 3 | 442 | 0.63 | 0.77 | 38 | empty |
| 4 | 284 | 0.58 | 0.78 | 36 | empty |
| 5 | 110 | 0.41 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6S7B0
- Elsewhere: UniProt Q6S7B0 · AlphaFold DB Q6S7B0
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