Research workbench
AlphaFold monomer V2.0 prediction for tata box-binding protein- associated factor RNA polymerase I subunit B (O01914)
Analyse AlphaFold monomer V2.0 prediction for tata box-binding protein- associated… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O01914
- Type
- protein
- Length
- 865 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Tata box-binding protein-associated factor RNA polymerase I subunit B
- UniProt
- O01914
- Pockets
- 15 · best druggability 0.75
Structure
1 distinct chain · 44% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tata box-binding protein-associated factor RNA polymerase I subunit B | protein | 865 | 44% helix, 11% strand | O01914 |
Pockets
15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 417 | 0.75 | 0.85 | 45 | empty |
| 2 | 795 | 0.73 | 0.78 | 72 | empty |
| 3 | 61 | 0.71 | 0.97 | 18 | empty |
| 4 | 421 | 0.64 | 0.78 | 42 | empty |
| 5 | 191 | 0.51 | 0.77 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O01914
- Elsewhere: UniProt O01914 · AlphaFold DB O01914
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