Research workbench
AlphaFold monomer V2.0 prediction for listeriolysin O (B8DGM3)
Analyse AlphaFold monomer V2.0 prediction for listeriolysin O (B8DGM3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8DGM3
- Type
- protein
- Length
- 529 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf2CA16F9f8EE37a4C91624cCc30bDf6c3e8E7131
- Molecule
- Listeriolysin O
- UniProt
- B8DGM3
- Pockets
- 4 · best druggability 0.57
Structure
1 distinct chain · 20% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Listeriolysin O | protein | 529 | 20% helix, 38% strand | B8DGM3 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 120 | 0.57 | 0.84 | 31 | empty |
| 2 | 186 | 0.44 | 0.74 | 28 | empty |
| 3 | 134 | 0.41 | 0.74 | 18 | empty |
| 4 | 121 | 0.40 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8DGM3
- Elsewhere: UniProt B8DGM3 · AlphaFold DB B8DGM3
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