Research workbench
AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (Q46JD7)
Analyse AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (Q46JD7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q46JD7
- Type
- protein
- Length
- 415 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2212E7C2D74dEcE3Be1026CF82bc07Dd6C6F59a9
- Molecule
- Tyrosine--tRNA ligase
- UniProt
- Q46JD7
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 47% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine--tRNA ligase | protein | 415 | 47% helix, 13% strand | Q46JD7 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 499 | 0.79 | 0.86 | 46 | empty |
| 2 | 149 | 0.52 | 0.80 | 29 | empty |
| 3 | 122 | 0.50 | 0.80 | 19 | empty |
| 4 | 62 | 0.32 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q46JD7
- Elsewhere: UniProt Q46JD7 · AlphaFold DB Q46JD7
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