Research workbench
AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (Q89M63)
Analyse AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (Q89M63) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q89M63
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Tyrosine--tRNA ligase
- UniProt
- Q89M63
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 49% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine--tRNA ligase | protein | 417 | 49% helix, 15% strand | Q89M63 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 522 | 0.76 | 0.83 | 58 | empty |
| 2 | 292 | 0.54 | 0.75 | 31 | empty |
| 3 | 100 | 0.44 | 0.78 | 17 | empty |
| 4 | 53 | 0.32 | 0.77 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q89M63
- Elsewhere: UniProt Q89M63 · AlphaFold DB Q89M63
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