Research workbench
AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (Q5WEB8)
Analyse AlphaFold monomer V2.0 prediction for tyrosine--tRNA ligase (Q5WEB8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5WEB8
- Type
- protein
- Length
- 414 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Tyrosine--tRNA ligase
- UniProt
- Q5WEB8
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Tyrosine--tRNA ligase | protein | 414 | 50% helix, 15% strand | Q5WEB8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 460 | 0.74 | 0.83 | 55 | empty |
| 2 | 94 | 0.37 | 0.75 | 21 | empty |
| 3 | 61 | 0.36 | 0.78 | 17 | empty |
| 4 | 67 | 0.32 | 0.75 | 11 | empty |
| 5 | 51 | 0.27 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5WEB8
- Elsewhere: UniProt Q5WEB8 · AlphaFold DB Q5WEB8
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