Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q8ZBH1)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q8ZBH1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8ZBH1
- Type
- protein
- Length
- 965 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd42330059Fd4881e991492B9A3dB324d13Cca166
- Molecule
- Valine--tRNA ligase
- UniProt
- Q8ZBH1
- Pockets
- 7 · best druggability 0.80
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 965 | 48% helix, 19% strand | Q8ZBH1 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1087 | 0.80 | 0.82 | 78 | empty |
| 2 | 655 | 0.71 | 0.79 | 70 | empty |
| 3 | 112 | 0.39 | 0.75 | 17 | empty |
| 4 | 86 | 0.38 | 0.77 | 16 | empty |
| 5 | 117 | 0.38 | 0.74 | 25 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8ZBH1
- Elsewhere: UniProt Q8ZBH1 · AlphaFold DB Q8ZBH1
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