Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q4UQP3)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q4UQP3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4UQP3
- Type
- protein
- Length
- 944 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFE12884Eff419603b6dFefe423f9b5276dad6aD4
- Molecule
- Valine--tRNA ligase
- UniProt
- Q4UQP3
- Pockets
- 6 · best druggability 0.79
Structure
1 distinct chain · 49% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 944 | 49% helix, 19% strand | Q4UQP3 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1045 | 0.79 | 0.81 | 66 | empty |
| 2 | 662 | 0.73 | 0.79 | 68 | empty |
| 3 | 98 | 0.42 | 0.78 | 24 | empty |
| 4 | 78 | 0.37 | 0.77 | 16 | empty |
| 5 | 99 | 0.35 | 0.74 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4UQP3
- Elsewhere: UniProt Q4UQP3 · AlphaFold DB Q4UQP3
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