Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q87LG6)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q87LG6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q87LG6
- Type
- protein
- Length
- 952 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x07769FccfCA38eD8b3F70D165ddF64fA6c8EB6b2
- Molecule
- Valine--tRNA ligase
- UniProt
- Q87LG6
- Pockets
- 8 · best druggability 0.81
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 952 | 48% helix, 19% strand | Q87LG6 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1037 | 0.81 | 0.82 | 67 | empty |
| 2 | 441 | 0.63 | 0.77 | 46 | empty |
| 3 | 256 | 0.63 | 0.81 | 27 | empty |
| 4 | 96 | 0.40 | 0.77 | 19 | empty |
| 5 | 71 | 0.32 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87LG6
- Elsewhere: UniProt Q87LG6 · AlphaFold DB Q87LG6
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