Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q55522)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q55522) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55522
- Type
- protein
- Length
- 910 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5CDCbD175F2cA0177f37C7536c342613301161dE
- Molecule
- Valine--tRNA ligase
- UniProt
- Q55522
- Pockets
- 9 · best druggability 0.77
Structure
1 distinct chain · 49% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 910 | 49% helix, 18% strand | Q55522 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 769 | 0.77 | 0.81 | 59 | empty |
| 2 | 599 | 0.72 | 0.80 | 69 | empty |
| 3 | 71 | 0.56 | 0.88 | 15 | empty |
| 4 | 156 | 0.44 | 0.76 | 24 | empty |
| 5 | 123 | 0.43 | 0.76 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55522
- Elsewhere: UniProt Q55522 · AlphaFold DB Q55522
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