Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (A5CCE0)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (A5CCE0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5CCE0
- Type
- protein
- Length
- 854 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC51AAe4Cb53B659c60B10bbf8c60DBDcfBeBfafd
- Molecule
- Valine--tRNA ligase
- UniProt
- A5CCE0
- Pockets
- 7 · best druggability 0.73
Structure
1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 854 | 45% helix, 20% strand | A5CCE0 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 644 | 0.73 | 0.80 | 46 | empty |
| 2 | 375 | 0.71 | 0.83 | 46 | empty |
| 3 | 93 | 0.38 | 0.76 | 17 | empty |
| 4 | 93 | 0.38 | 0.76 | 18 | empty |
| 5 | 77 | 0.35 | 0.76 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5CCE0
- Elsewhere: UniProt A5CCE0 · AlphaFold DB A5CCE0
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