Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q5Z048)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q5Z048) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5Z048
- Type
- protein
- Length
- 893 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0F7aAe0F58509eB3BaA013d642d748C7C38B0F93
- Molecule
- Valine--tRNA ligase
- UniProt
- Q5Z048
- Pockets
- 9 · best druggability 0.74
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 893 | 47% helix, 18% strand | Q5Z048 |
Pockets
9 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 795 | 0.74 | 0.79 | 58 | empty |
| 2 | 423 | 0.64 | 0.78 | 45 | empty |
| 3 | 234 | 0.61 | 0.81 | 29 | empty |
| 4 | 201 | 0.55 | 0.79 | 25 | empty |
| 5 | 94 | 0.43 | 0.78 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5Z048
- Elsewhere: UniProt Q5Z048 · AlphaFold DB Q5Z048
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