Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q3IUE5)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q3IUE5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3IUE5
- Type
- protein
- Length
- 872 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0cE76B7F8915Cc57577C945A00B4C30754dBdf7f
- Molecule
- Valine--tRNA ligase
- UniProt
- Q3IUE5
- Pockets
- 5 · best druggability 0.70
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 872 | 42% helix, 22% strand | Q3IUE5 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 542 | 0.70 | 0.79 | 51 | empty |
| 2 | 465 | 0.66 | 0.78 | 51 | empty |
| 3 | 63 | 0.54 | 0.88 | 16 | empty |
| 4 | 59 | 0.31 | 0.75 | 12 | empty |
| 5 | 84 | 0.31 | 0.73 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3IUE5
- Elsewhere: UniProt Q3IUE5 · AlphaFold DB Q3IUE5
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