Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (P9WFS9)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (P9WFS9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P9WFS9
- Type
- protein
- Length
- 886 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8873c1b38A148297C06f7797E3A5aBaef6A3Feba
- Molecule
- Valine--tRNA ligase
- UniProt
- P9WFS9
- Pockets
- 7 · best druggability 0.76
Structure
1 distinct chain · 46% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 886 | 46% helix, 18% strand | P9WFS9 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 686 | 0.76 | 0.82 | 59 | empty |
| 2 | 680 | 0.72 | 0.78 | 69 | empty |
| 3 | 201 | 0.51 | 0.77 | 25 | empty |
| 4 | 126 | 0.39 | 0.74 | 21 | empty |
| 5 | 66 | 0.37 | 0.78 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P9WFS9
- Elsewhere: UniProt P9WFS9 · AlphaFold DB P9WFS9
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