Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q65S97)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q65S97) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q65S97
- Type
- protein
- Length
- 954 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc1787D436e4D305ADFB98fC66B68c7ee25625029
- Molecule
- Valine--tRNA ligase
- UniProt
- Q65S97
- Pockets
- 10 · best druggability 0.81
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 954 | 48% helix, 19% strand | Q65S97 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1092 | 0.81 | 0.82 | 80 | empty |
| 2 | 614 | 0.71 | 0.79 | 68 | empty |
| 3 | 176 | 0.48 | 0.76 | 32 | empty |
| 4 | 151 | 0.46 | 0.77 | 25 | empty |
| 5 | 56 | 0.37 | 0.80 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q65S97
- Elsewhere: UniProt Q65S97 · AlphaFold DB Q65S97
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