Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q88UX7)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q88UX7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q88UX7
- Type
- protein
- Length
- 889 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7FDF8b382C6a36A8772D1A265E8e480c7DF0A9C1
- Molecule
- Valine--tRNA ligase
- UniProt
- Q88UX7
- Pockets
- 4 · best druggability 0.76
Structure
1 distinct chain · 48% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 889 | 48% helix, 19% strand | Q88UX7 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 858 | 0.76 | 0.80 | 68 | empty |
| 2 | 564 | 0.70 | 0.79 | 63 | empty |
| 3 | 100 | 0.35 | 0.74 | 18 | empty |
| 4 | 71 | 0.33 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88UX7
- Elsewhere: UniProt Q88UX7 · AlphaFold DB Q88UX7
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