Research workbench
AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q5FF72)
Analyse AlphaFold monomer V2.0 prediction for valine--tRNA ligase (Q5FF72) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5FF72
- Type
- protein
- Length
- 812 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x39503d07CAEBE301c26d2951764fa147CEd0a274
- Molecule
- Valine--tRNA ligase
- UniProt
- Q5FF72
- Pockets
- 11 · best druggability 0.75
Structure
1 distinct chain · 44% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Valine--tRNA ligase | protein | 812 | 44% helix, 19% strand | Q5FF72 |
Pockets
11 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 741 | 0.75 | 0.80 | 58 | empty |
| 2 | 86 | 0.74 | 0.96 | 22 | empty |
| 3 | 452 | 0.70 | 0.81 | 48 | empty |
| 4 | 155 | 0.56 | 0.81 | 27 | empty |
| 5 | 116 | 0.41 | 0.76 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5FF72
- Elsewhere: UniProt Q5FF72 · AlphaFold DB Q5FF72
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