Research workbench
AlphaFold monomer V2.0 prediction for probable valine--tRNA ligase, cytoplasmic (C4V924)
Analyse AlphaFold monomer V2.0 prediction for probable valine--tRNA ligase, cytoplasmic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C4V924
- Type
- protein
- Length
- 883 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Probable valine--tRNA ligase, cytoplasmic
- UniProt
- C4V924
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 45% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable valine--tRNA ligase, cytoplasmic | protein | 883 | 45% helix, 19% strand | C4V924 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1166 | 0.82 | 0.83 | 94 | empty |
| 2 | 413 | 0.67 | 0.79 | 41 | empty |
| 3 | 252 | 0.60 | 0.79 | 33 | empty |
| 4 | 52 | 0.50 | 0.87 | 15 | empty |
| 5 | 84 | 0.43 | 0.80 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C4V924
- Elsewhere: UniProt C4V924 · AlphaFold DB C4V924
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