Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (P56881)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (P56881) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P56881
- Type
- protein
- Length
- 659 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Threonine--tRNA ligase
- UniProt
- P56881
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 37% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 659 | 37% helix, 26% strand | P56881 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 412 | 0.74 | 0.84 | 39 | empty |
| 2 | 129 | 0.53 | 0.81 | 21 | empty |
| 3 | 76 | 0.51 | 0.84 | 20 | empty |
| 4 | 152 | 0.49 | 0.78 | 23 | empty |
| 5 | 101 | 0.43 | 0.78 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P56881
- Elsewhere: UniProt P56881 · AlphaFold DB P56881
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