Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q5JGC8)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q5JGC8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5JGC8
- Type
- protein
- Length
- 626 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x80D2ac0F5e3268bC5C1d28BBAA07E3169BB02b79
- Molecule
- Threonine--tRNA ligase
- UniProt
- Q5JGC8
- Pockets
- 5 · best druggability 0.81
Structure
1 distinct chain · 38% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 626 | 38% helix, 29% strand | Q5JGC8 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1008 | 0.81 | 0.82 | 57 | empty |
| 2 | 158 | 0.55 | 0.80 | 23 | empty |
| 3 | 211 | 0.53 | 0.77 | 19 | empty |
| 4 | 112 | 0.37 | 0.73 | 24 | empty |
| 5 | 62 | 0.34 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JGC8
- Elsewhere: UniProt Q5JGC8 · AlphaFold DB Q5JGC8
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