Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (B1MXZ5)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (B1MXZ5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1MXZ5
- Type
- protein
- Length
- 653 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Threonine--tRNA ligase
- UniProt
- B1MXZ5
- Pockets
- 8 · best druggability 0.67
Structure
1 distinct chain · 38% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 653 | 38% helix, 28% strand | B1MXZ5 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 392 | 0.67 | 0.80 | 48 | empty |
| 2 | 254 | 0.50 | 0.75 | 39 | empty |
| 3 | 167 | 0.49 | 0.77 | 20 | empty |
| 4 | 108 | 0.38 | 0.75 | 19 | empty |
| 5 | 75 | 0.37 | 0.77 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1MXZ5
- Elsewhere: UniProt B1MXZ5 · AlphaFold DB B1MXZ5
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