Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (C5D639)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (C5D639) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5D639
- Type
- protein
- Length
- 644 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Threonine--tRNA ligase
- UniProt
- C5D639
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 38% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 644 | 38% helix, 28% strand | C5D639 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 759 | 0.71 | 0.78 | 74 | empty |
| 2 | 112 | 0.41 | 0.76 | 18 | empty |
| 3 | 98 | 0.36 | 0.75 | 19 | empty |
| 4 | 78 | 0.29 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5D639
- Elsewhere: UniProt C5D639 · AlphaFold DB C5D639
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