Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (B1IPK9)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (B1IPK9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1IPK9
- Type
- protein
- Length
- 642 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Threonine--tRNA ligase
- UniProt
- B1IPK9
- Pockets
- 5 · best druggability 0.68
Structure
1 distinct chain · 39% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 642 | 39% helix, 29% strand | B1IPK9 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 421 | 0.68 | 0.80 | 37 | empty |
| 2 | 213 | 0.51 | 0.76 | 37 | empty |
| 3 | 74 | 0.50 | 0.84 | 22 | empty |
| 4 | 52 | 0.36 | 0.79 | 11 | empty |
| 5 | 66 | 0.26 | 0.72 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1IPK9
- Elsewhere: UniProt B1IPK9 · AlphaFold DB B1IPK9
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