Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q0TMX8)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q0TMX8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0TMX8
- Type
- protein
- Length
- 643 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9188600a0FCa2914254C94299b1bd9721Bc4D500
- Molecule
- Threonine--tRNA ligase
- UniProt
- Q0TMX8
- Pockets
- 7 · best druggability 0.74
Structure
1 distinct chain · 37% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 643 | 37% helix, 28% strand | Q0TMX8 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 499 | 0.74 | 0.83 | 45 | empty |
| 2 | 232 | 0.51 | 0.76 | 23 | empty |
| 3 | 123 | 0.42 | 0.76 | 20 | empty |
| 4 | 93 | 0.36 | 0.75 | 18 | empty |
| 5 | 71 | 0.30 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0TMX8
- Elsewhere: UniProt Q0TMX8 · AlphaFold DB Q0TMX8
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