Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q11JM1)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q11JM1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q11JM1
- Type
- protein
- Length
- 656 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbb2F1C7CB3A1eeFAc24fCa72cc627162D5413FD7
- Molecule
- Threonine--tRNA ligase
- UniProt
- Q11JM1
- Pockets
- 5 · best druggability 0.68
Structure
1 distinct chain · 39% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 656 | 39% helix, 27% strand | Q11JM1 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 426 | 0.68 | 0.80 | 36 | empty |
| 2 | 209 | 0.53 | 0.77 | 25 | empty |
| 3 | 65 | 0.33 | 0.76 | 15 | empty |
| 4 | 51 | 0.28 | 0.75 | 16 | empty |
| 5 | 51 | 0.23 | 0.71 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q11JM1
- Elsewhere: UniProt Q11JM1 · AlphaFold DB Q11JM1
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