Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (B8D8S6)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (B8D8S6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8D8S6
- Type
- protein
- Length
- 642 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1Eec5F29CD795323506a0E09aeC21c942c4b00a7
- Molecule
- Threonine--tRNA ligase
- UniProt
- B8D8S6
- Pockets
- 4 · best druggability 0.68
Structure
1 distinct chain · 37% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 642 | 37% helix, 30% strand | B8D8S6 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 410 | 0.68 | 0.80 | 41 | empty |
| 2 | 53 | 0.58 | 0.91 | 16 | empty |
| 3 | 70 | 0.39 | 0.79 | 10 | empty |
| 4 | 68 | 0.30 | 0.74 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8D8S6
- Elsewhere: UniProt B8D8S6 · AlphaFold DB B8D8S6
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