Research workbench
AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q0SMD6)
Analyse AlphaFold monomer V2.0 prediction for threonine--tRNA ligase (Q0SMD6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0SMD6
- Type
- protein
- Length
- 581 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5881B09f2D8e743400698633641fc1cD2Ed2BE6F
- Molecule
- Threonine--tRNA ligase
- UniProt
- Q0SMD6
- Pockets
- 7 · best druggability 0.68
Structure
1 distinct chain · 38% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Threonine--tRNA ligase | protein | 581 | 38% helix, 28% strand | Q0SMD6 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 387 | 0.68 | 0.81 | 38 | empty |
| 2 | 222 | 0.53 | 0.77 | 29 | empty |
| 3 | 56 | 0.49 | 0.86 | 19 | empty |
| 4 | 72 | 0.36 | 0.77 | 12 | empty |
| 5 | 54 | 0.34 | 0.78 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0SMD6
- Elsewhere: UniProt Q0SMD6 · AlphaFold DB Q0SMD6
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