Research workbench
AlphaFold monomer V2.0 prediction for serine--tRNA ligase (Q7VAZ8)
Analyse AlphaFold monomer V2.0 prediction for serine--tRNA ligase (Q7VAZ8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7VAZ8
- Type
- protein
- Length
- 425 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Serine--tRNA ligase
- UniProt
- Q7VAZ8
- Pockets
- 5 · best druggability 0.71
Structure
1 distinct chain · 44% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine--tRNA ligase | protein | 425 | 44% helix, 20% strand | Q7VAZ8 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 553 | 0.71 | 0.80 | 56 | empty |
| 2 | 71 | 0.44 | 0.81 | 16 | empty |
| 3 | 96 | 0.39 | 0.77 | 19 | empty |
| 4 | 62 | 0.36 | 0.78 | 15 | empty |
| 5 | 75 | 0.35 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7VAZ8
- Elsewhere: UniProt Q7VAZ8 · AlphaFold DB Q7VAZ8
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