Research workbench
AlphaFold monomer V2.0 prediction for serine--tRNA ligase (B9DXT9)
Analyse AlphaFold monomer V2.0 prediction for serine--tRNA ligase (B9DXT9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B9DXT9
- Type
- protein
- Length
- 426 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x97EfFf2d74994e28D3b69b1503Bd9c292B2Df480
- Molecule
- Serine--tRNA ligase
- UniProt
- B9DXT9
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 43% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine--tRNA ligase | protein | 426 | 43% helix, 20% strand | B9DXT9 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 707 | 0.75 | 0.81 | 60 | empty |
| 2 | 91 | 0.41 | 0.77 | 19 | empty |
| 3 | 70 | 0.29 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9DXT9
- Elsewhere: UniProt B9DXT9 · AlphaFold DB B9DXT9
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