Research workbench
AlphaFold monomer V2.0 prediction for serine--tRNA ligase (B8D9A3)
Analyse AlphaFold monomer V2.0 prediction for serine--tRNA ligase (B8D9A3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8D9A3
- Type
- protein
- Length
- 427 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7685B9fa508EdDc6F188093f78e9d9989bf5b60b
- Molecule
- Serine--tRNA ligase
- UniProt
- B8D9A3
- Pockets
- 3 · best druggability 0.74
Structure
1 distinct chain · 45% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine--tRNA ligase | protein | 427 | 45% helix, 22% strand | B8D9A3 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 626 | 0.74 | 0.81 | 52 | empty |
| 2 | 121 | 0.39 | 0.75 | 18 | empty |
| 3 | 68 | 0.35 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8D9A3
- Elsewhere: UniProt B8D9A3 · AlphaFold DB B8D9A3
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