Research workbench
AlphaFold monomer V2.0 prediction for serine--tRNA ligase, cytoplasmic (Q5R9K9)
Analyse AlphaFold monomer V2.0 prediction for serine--tRNA ligase, cytoplasmic (Q5R9K9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5R9K9
- Type
- protein
- Length
- 514 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA6318dD41b1De2301Feb168Fd8B7A680CA852cFA
- Molecule
- Serine--tRNA ligase, cytoplasmic
- UniProt
- Q5R9K9
- Pockets
- 4 · best druggability 0.71
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Serine--tRNA ligase, cytoplasmic | protein | 514 | 47% helix, 18% strand | Q5R9K9 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 565 | 0.71 | 0.80 | 56 | empty |
| 2 | 127 | 0.38 | 0.74 | 15 | empty |
| 3 | 129 | 0.38 | 0.74 | 25 | empty |
| 4 | 118 | 0.37 | 0.73 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5R9K9
- Elsewhere: UniProt Q5R9K9 · AlphaFold DB Q5R9K9
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