Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q66AV1)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q66AV1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q66AV1
- Type
- protein
- Length
- 576 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0CC4140Ba225D530b2DC080d22627144DEBB1186
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q66AV1
- Pockets
- 8 · best druggability 0.66
Structure
1 distinct chain · 55% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 576 | 55% helix, 12% strand | Q66AV1 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 390 | 0.66 | 0.79 | 42 | empty |
| 2 | 86 | 0.57 | 0.86 | 18 | empty |
| 3 | 127 | 0.43 | 0.76 | 20 | empty |
| 4 | 80 | 0.42 | 0.79 | 17 | empty |
| 5 | 64 | 0.42 | 0.81 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q66AV1
- Elsewhere: UniProt Q66AV1 · AlphaFold DB Q66AV1
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