Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q8PFR2)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q8PFR2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8PFR2
- Type
- protein
- Length
- 562 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2D66E52c10E6ca18B71025Bc03B36776503CcD0e
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q8PFR2
- Pockets
- 5 · best druggability 0.67
Structure
1 distinct chain · 51% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 562 | 51% helix, 14% strand | Q8PFR2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 467 | 0.67 | 0.79 | 59 | empty |
| 2 | 109 | 0.40 | 0.76 | 18 | empty |
| 3 | 103 | 0.38 | 0.75 | 20 | empty |
| 4 | 99 | 0.37 | 0.75 | 18 | empty |
| 5 | 53 | 0.27 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PFR2
- Elsewhere: UniProt Q8PFR2 · AlphaFold DB Q8PFR2
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