Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q5GT78)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q5GT78) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5GT78
- Type
- protein
- Length
- 565 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q5GT78
- Pockets
- 8 · best druggability 0.63
Structure
1 distinct chain · 52% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 565 | 52% helix, 13% strand | Q5GT78 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 302 | 0.63 | 0.80 | 35 | empty |
| 2 | 108 | 0.47 | 0.80 | 22 | empty |
| 3 | 106 | 0.44 | 0.78 | 17 | empty |
| 4 | 184 | 0.41 | 0.72 | 22 | empty |
| 5 | 138 | 0.41 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5GT78
- Elsewhere: UniProt Q5GT78 · AlphaFold DB Q5GT78
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