Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q8KPU9)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q8KPU9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8KPU9
- Type
- protein
- Length
- 584 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5BeA89782341f98147F2D811B063F91F0aE7D7bF
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q8KPU9
- Pockets
- 8 · best druggability 0.59
Structure
1 distinct chain · 56% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 584 | 56% helix, 11% strand | Q8KPU9 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.59 | 0.88 | 20 | empty |
| 2 | 241 | 0.59 | 0.79 | 35 | empty |
| 3 | 209 | 0.51 | 0.76 | 35 | empty |
| 4 | 112 | 0.50 | 0.81 | 25 | empty |
| 5 | 83 | 0.37 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8KPU9
- Elsewhere: UniProt Q8KPU9 · AlphaFold DB Q8KPU9
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