Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q5FQ54)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q5FQ54) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5FQ54
- Type
- protein
- Length
- 602 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1549cA1d9C2Be61a42eFaCA21D299D03Be72296F
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q5FQ54
- Pockets
- 9 · best druggability 0.64
Structure
1 distinct chain · 53% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 602 | 53% helix, 13% strand | Q5FQ54 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 404 | 0.64 | 0.78 | 46 | empty |
| 2 | 140 | 0.45 | 0.76 | 28 | empty |
| 3 | 130 | 0.43 | 0.76 | 20 | empty |
| 4 | 129 | 0.38 | 0.73 | 20 | empty |
| 5 | 80 | 0.37 | 0.77 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5FQ54
- Elsewhere: UniProt Q5FQ54 · AlphaFold DB Q5FQ54
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