Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q5NHI8)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q5NHI8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5NHI8
- Type
- protein
- Length
- 581 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7d626243aF5Ca6d5eB0779378463DcADA09F69c7
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q5NHI8
- Pockets
- 7 · best druggability 0.66
Structure
1 distinct chain · 54% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 581 | 54% helix, 12% strand | Q5NHI8 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 416 | 0.66 | 0.79 | 37 | empty |
| 2 | 271 | 0.53 | 0.76 | 27 | empty |
| 3 | 185 | 0.50 | 0.77 | 25 | empty |
| 4 | 67 | 0.40 | 0.80 | 15 | empty |
| 5 | 59 | 0.36 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NHI8
- Elsewhere: UniProt Q5NHI8 · AlphaFold DB Q5NHI8
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