Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (B1YNQ7)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (B1YNQ7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1YNQ7
- Type
- protein
- Length
- 593 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- Arginine--tRNA ligase
- UniProt
- B1YNQ7
- Pockets
- 5 · best druggability 0.63
Structure
1 distinct chain · 53% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 593 | 53% helix, 13% strand | B1YNQ7 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 383 | 0.63 | 0.78 | 54 | empty |
| 2 | 239 | 0.58 | 0.79 | 34 | empty |
| 3 | 88 | 0.44 | 0.80 | 19 | empty |
| 4 | 152 | 0.43 | 0.75 | 23 | empty |
| 5 | 51 | 0.26 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1YNQ7
- Elsewhere: UniProt B1YNQ7 · AlphaFold DB B1YNQ7
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