Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q2YNJ9)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase (Q2YNJ9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2YNJ9
- Type
- protein
- Length
- 585 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6961B4b07eE2C5156c6Be063Bd561aE781B2875d
- Molecule
- Arginine--tRNA ligase
- UniProt
- Q2YNJ9
- Pockets
- 5 · best druggability 0.69
Structure
1 distinct chain · 54% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase | protein | 585 | 54% helix, 13% strand | Q2YNJ9 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 457 | 0.69 | 0.80 | 53 | empty |
| 2 | 218 | 0.49 | 0.75 | 21 | empty |
| 3 | 61 | 0.39 | 0.79 | 13 | empty |
| 4 | 82 | 0.34 | 0.75 | 15 | empty |
| 5 | 56 | 0.29 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2YNJ9
- Elsewhere: UniProt Q2YNJ9 · AlphaFold DB Q2YNJ9
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