Research workbench
AlphaFold monomer V2.0 prediction for arginine--tRNA ligase, cytoplasmic (Q9D0I9)
Analyse AlphaFold monomer V2.0 prediction for arginine--tRNA ligase, cytoplasmic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9D0I9
- Type
- protein
- Length
- 660 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Arginine--tRNA ligase, cytoplasmic
- UniProt
- Q9D0I9
- Pockets
- 10 · best druggability 0.64
Structure
1 distinct chain · 57% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arginine--tRNA ligase, cytoplasmic | protein | 660 | 57% helix, 11% strand | Q9D0I9 |
Pockets
10 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 319 | 0.64 | 0.80 | 38 | empty |
| 2 | 325 | 0.58 | 0.76 | 40 | empty |
| 3 | 80 | 0.48 | 0.82 | 15 | empty |
| 4 | 90 | 0.47 | 0.81 | 14 | empty |
| 5 | 106 | 0.43 | 0.77 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9D0I9
- Elsewhere: UniProt Q9D0I9 · AlphaFold DB Q9D0I9
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