Research workbench
AlphaFold monomer V2.0 prediction for probable arginine--tRNA ligase, cytoplasmic (Q9VXN4)
Analyse AlphaFold monomer V2.0 prediction for probable arginine--tRNA ligase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9VXN4
- Type
- protein
- Length
- 665 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB6a282F34B389c8F93d7740Ec39199b618a658B3
- Molecule
- Probable arginine--tRNA ligase, cytoplasmic
- UniProt
- Q9VXN4
- Pockets
- 8 · best druggability 0.67
Structure
1 distinct chain · 57% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable arginine--tRNA ligase, cytoplasmic | protein | 665 | 57% helix, 10% strand | Q9VXN4 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 111 | 0.67 | 0.90 | 22 | empty |
| 2 | 349 | 0.65 | 0.80 | 36 | empty |
| 3 | 83 | 0.46 | 0.81 | 17 | empty |
| 4 | 111 | 0.41 | 0.76 | 18 | empty |
| 5 | 140 | 0.41 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9VXN4
- Elsewhere: UniProt Q9VXN4 · AlphaFold DB Q9VXN4
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