Research workbench
AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q8DBH9)
Analyse AlphaFold monomer V2.0 prediction for proline--tRNA ligase (Q8DBH9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8DBH9
- Type
- protein
- Length
- 571 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Proline--tRNA ligase
- UniProt
- Q8DBH9
- Pockets
- 3 · best druggability 0.72
Structure
1 distinct chain · 29% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proline--tRNA ligase | protein | 571 | 29% helix, 29% strand | Q8DBH9 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 488 | 0.72 | 0.82 | 47 | empty |
| 2 | 104 | 0.46 | 0.79 | 22 | empty |
| 3 | 60 | 0.35 | 0.78 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8DBH9
- Elsewhere: UniProt Q8DBH9 · AlphaFold DB Q8DBH9
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